Merge fastqs

And again, we are merging all fastq files:

cat ~/workdir/basecall/*.fastq | gzip > ~/workdir/basecall/basecall.fastq.gz
cat ~/workdir/basecall_small/*.fastq | gzip > ~/workdir/basecall_small/basecall.fastq.gz

If you want, you can check again for the number of reads:

zcat ~/workdir/basecall_small/basecall.fastq.gz | wc | awk '{print $1/4}'
or
zcat ~/workdir/basecall/basecall.fastq.gz | wc | awk '{print $1/4}'